The Lysosome Gene Database


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Two types of queries can be made:

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Sources & Softwares used for the predictions

miRanda
Target Site Predictions, Good mirSVR score, Conserved miRNA, August 2010 Release Downloads

TargetScan
Predicted Conserved Targets Info

PITA
PITA Sites catalog, Top, no flank

picTar 4-5 way
Predictions as published in Lall et al. 2006.

miRTarBase

TFEB binding sites
sites as reported in Palmieri et al. 2011.

CLEAR motifs
Positions on human genome (hg19) of the CLEAR sequence "GTCACGTGAC" searched using fuzznuc allowing a single mismatch.